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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:52:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Notothenia rossii genome assembly, chromosome: 1.
OX449111.1:76953045-76953063
TTCATGCTCAGTTTAACGCTTTTATTCACA76953045TTGCTGTGTTTGTGGTCGGGCTCCCGACCGTTTTTGTTACCTTTCAGGC
rni.09.F10.5 MBra685 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence.
CK644080.1:159-177
CTGTTGCTAAAAGCCCTAAACCACGAGCTA159TTGCTGTGTTTGTGGTCGGGTTCTGGATTCTTGACGTTGCTAATAACAT
BCXiang2_FW_018_D09_07March2003_037 Brassica carinata - Xiang2 Brassica carinata cDNA 5', mRNA sequence.
EE546972.1:474-492
TACTCGCCATTTTATCCTCTTATAATTTTG474TTGCTGTGTTTGTGGTCGGGGGGGGGGGGGGG
U_UZ-100602_plate17k04.b1 Full-length enriched cDNA library of cassava MPER417-003 Manihot esculenta subsp. peruviana cDNA, mRNA sequence.
JG993042.1:479-497
CTGTTGCTAAAAGCCCTAAACCACGAGCTA479TTGCTGTGTTTGTGGTCGGGTTCTGGATTCTTGACGTTGCTAATAACAT
U_UZ-100602_plate1l05.b1 Full-length enriched cDNA library of cassava MPER417-003 Manihot esculenta subsp. peruviana cDNA, mRNA sequence.
JG994077.1:492-510
CTGTTGCTAAAAGCCCCAAACCACGAGCTA492TTGCTGTGTTTGTGGTCGGGTTCTGGATTCTTGACGTTGCTAATAACAT
Manihot esculenta sucrose transporter type 1 (SUT1) mRNA, partial cds.
DQ138374.1:143-161
CTGTTGCTAAAAGCCCTAAACCACGAGCTA143TTGCTGTGTTTGTGGTCGGGTTCTGGATTCTTGACGTTGCTAATAACAT
Manihot esculenta sucrose transporter (SUT1a) mRNA, complete cds.
KT876449.1:475-493
CTGTTGCTAAAAGCCCTAAACCACGAGCTA475TTGCTGTGTTTGTGGTCGGGTTCTGGATTCTTGACGTTGCTAATAACAT
Chilo suppressalis genome assembly, chromosome: 22.
OU963915.1:1891505-1891523
GTATCCAACCAAATTCTGATCTTGCGATGT1891505TTGCTGTGTTTGTGGTCGGGGATTCCCCGTTTATCCTCCGCAGTACACT
Lumbricus rubellus genome assembly, chromosome: 16.
OX243826.1:22704472-22704490
GCAGTTGTCTGACGCTAGACTGACTCTAAC22704472TTGCTGTGTTTGTGGTCGGTTGTTGAATCGTCCAATGGGTCCAGCTCGT
Sciurus vulgaris genome assembly, chromosome: 3.
LR738613.1:159009793-159009811
TTCTGGAGCTCCCCTTCTAACAGCGGGGGA159009793CCGACCACAAACACAGCAACAACAGTAACAGTGACACAGTGATTTCAGG
Mastacembelus armatus genome assembly, chromosome: 16.
LR535848.1:25507422-25507440
AAGTTGCACCATTTATTTCCCAAAACATTT25507422CCGACCACAAACACAGCAATGGGAGTGAAGGACGCGGTGAACGCCACCG
Pseudochaenichthys georgianus genome assembly, chromosome: 4.
LR792549.1:21831994-21832012
GTCTGAAAGGTAACACAAACGGTCGGCAGC21831994CCGACCACAAACACAGCAATGTGAATAAAAGCGTTAAACTGAGCATGAA
Bufo bufo genome assembly, chromosome: 5.
LR991671.1:454532918-454532936
CATAAACCACATAAACAACACAGCAACAGA454532918CCGACCACAAACACAGCAACACACAAAACTCTGTGAAACTACATACTCC
Solea senegalensis genome assembly, chromosome: B.
OW185633.1:36207333-36207351
CAAAACAGCAACAACTCCACCACGTGCTCG36207333CCGACCACAAACACAGCAAAGAGGATAATCCTGCAGTAGCGAGAGGCCT
MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-3 chromosome, complete genome.
CP060223.1:66046-66064
CCATCTGCCCCAACAAACGTAACAGTAGAT66046CCGACCACAAACACAGCAAATCGATTCACTTTCTCATGGGATGCACCAA
Endotricha flammealis genome assembly, chromosome: 24.
LR990877.1:2589189-2589207
CAATTTTGCAATTCATCCGATAAGCTAAGG2589189CCGACCACAAACACAGCAACTACTTTCTTGTATCATCAAATAGTATATC
Anania crocealis genome assembly, chromosome: 5.
OX438884.1:571982-572000
CTAATTGCCTGGGTGCAGGGGCTTTGACAG571982CCGACCACAAACACAGCAAGTTCACTAGTCACTACCCACGTCTTCCTTC
Lumbricus terrestris genome assembly, chromosome: 17.
OX457052.1:14080972-14080990
GCGAGCTGGACCCATTGGACGATTCAACAA14080972CCGACCACAAACACAGCAAGTCAGAGTCAGTCTAGCGTCAGACAACTGC
Sylvicola cinctus genome assembly, chromosome: 3.
OY974084.1:12253297-12253315
TAACCGTCCGTCGATAGCATCCCCACAATA12253297CCGACCACAAACACAGCAACAACAGCAACACCCGGATAAGGATCAAGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCTGTGTTTGTGGTCGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTGTGTTTGTGGTCGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.438 | 0.429 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTGTGTTTGTGGTCGG&k=0&no_gap=0&offset=0&limit=50
0.523 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=CCGACCACAAACACAGCAA&k=0&no_gap=0&offset=0&limit=41
0.530 | 0.007 | cgi_end;

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